MicrobiomeX® (Citrus Flavonoid Extract — BioActor)

Citrus sinensis, Citrus paradisi
Evidence Level
Limited
2 Clinical Trials
3 Documented Benefits
2/5 Evidence Score

MicrobiomeX® is a citrus flavonoid extract from BioActor (now majority-owned by Solabia), made from sweet orange (Citrus sinensis) and grapefruit (Citrus paradisi) and standardized to flavonoids, mostly hesperidin with a smaller amount of naringin. Marketed as a "flavobiotic," it is designed to work together with the gut microbiome rather than simply be absorbed: the flavonoids travel largely intact to the colon, where resident bacteria transform them into active metabolites. In a 12-week human study of adults with features of metabolic syndrome, daily supplementation shifted the balance of short-chain fatty acids the gut makes toward butyrate, the main fuel for the cells lining the colon, alongside a trend toward a lower marker of gut inflammation.

Studied Dose 500 mg per day; effects reported as dose-dependent between 250 and 500 mg.
Active Compound Citrus flavonoids, chiefly hesperidin (around 80%) with naringin (around 5%).

Benefits

Shifts gut fatty acids toward butyrate

In a 12-week study of adults with features of metabolic syndrome, daily supplementation shifted the mix of short-chain fatty acids the gut bacteria produce toward more butyrate, the preferred fuel for the cells lining the colon.

Supports a calmer gut environment

In the same study, the flavonoid extract was associated with a trend toward lower fecal calprotectin, a marker of gut inflammation, although this change did not reach statistical significance.

Prebiotic-like microbiome support

Rather than being fully absorbed, the citrus flavonoids reach the colon and are used by gut bacteria. In laboratory colon-model studies the extract nourished beneficial, short-chain-fatty-acid-producing species.

Mechanism of action

1

Converted by gut bacteria into active metabolites

Flavonoids such as hesperidin pass largely undigested into the colon, where resident bacteria cleave and transform them into smaller phenolic metabolites that are more readily absorbed and biologically active.

2

Fuels short-chain fatty acid production

By serving as a substrate for colonic fermentation, the flavonoids shift bacterial output toward short-chain fatty acids such as butyrate and acetate, which nourish the gut lining and help regulate the local immune environment.

3

Flavonoid antioxidant and anti-inflammatory activity

Hesperidin, naringin, and their microbial metabolites show antioxidant and anti-inflammatory activity in laboratory studies, which may contribute to the lower gut-inflammation marker seen in the human data.

Clinical trials

1
MicrobiomeX 12-Week SCFA & Gut-Inflammation RCT
PubMed

Randomised, double-blind, placebo-controlled trial of 500 mg/day citrus flavonoid extract for 12 weeks, paired with in vitro TIM-2 colon-model fermentation of the subjects' fecal samples (Maurer Sost M, Stevens Y, Salden B, Troost F, Masclee A, Venema K 2023, Foods 12(18):3413, PMID 37761122).

Adults with features of metabolic syndrome (overweight with low-grade gut inflammation); the manufacturer reports about 50 participants.

Twelve weeks of daily supplementation produced a significant shift in the short-chain fatty acid profile toward butyrate (p=0.022) versus placebo, plus a trend toward lower fecal calprotectin, a gut-inflammation marker, that did not reach significance (p=0.058). A single manufacturer-associated trial measuring gut biomarkers rather than clinical disease endpoints.

2
Citrus Extract in the TIM-2 Colon Model (In Vitro)
PubMed

Fermentation of the citrus extract in the validated TIM-2 colon model seeded with fecal microbiota from healthy donors, at doses equivalent to 250 and 350 mg/day (Sost MM, Ahles S, Verhoeven J, Verbruggen S, Stevens Y, Venema K 2021, Nutrients 13(11):3915, PMID 34836169).

Laboratory colon model seeded with fecal microbiota from healthy human volunteers (not a human trial).

The extract dose-dependently increased beneficial bacteria such as Roseburia and raised cumulative short-chain fatty acid production; in this particular model the SCFA shift favored acetate rather than butyrate. Mechanistic in vitro support for a prebiotic-like effect, not a clinical outcome.

Side effects and drug interactions

Common Potential side effects

Generally well-tolerated: the 12-week human study reported no significant safety concerns.
Mild digestive symptoms such as gas or bloating can occur as gut bacteria ferment the flavonoids.
Derived in part from citrus; anyone with a citrus allergy should avoid it.

Important Drug interactions

Made partly from grapefruit, but standardized to flavonoids (hesperidin, naringin) rather than the furanocoumarins behind the classic grapefruit drug interaction, so that specific risk is low; still, check with a pharmacist if you take grapefruit-sensitive medications.
Citrus flavonoids may mildly affect drug-metabolizing enzymes and transporters; if you take medications with a narrow safety margin, ask your doctor.
As a general precaution, take a few hours apart from time-critical medications.

Frequently asked questions about MicrobiomeX® (Citrus Flavonoid Extract — BioActor)

What is MicrobiomeX?

MicrobiomeX® is a citrus flavonoid extract from BioActor (now majority-owned by Solabia), made from sweet orange (Citrus sinensis) and grapefruit (Citrus paradisi) and standardized to flavonoids, mostly hesperidin with a smaller amount of naringin.

What is MicrobiomeX used for?

MicrobiomeX is researched primarily for Gut Health and Anti-Inflammatory. In a 12-week study of adults with features of metabolic syndrome, daily supplementation shifted the mix of short-chain fatty acids the gut bacteria produce toward more butyrate, the preferred fuel for the cells lining the colon.

What is the recommended dosage of MicrobiomeX?

The clinically studied dose is 500 mg per day; effects reported as dose-dependent between 250 and 500 mg. Always follow the product label and check with a healthcare provider for personal advice.

Is MicrobiomeX safe, and does it have side effects?

For most healthy adults, MicrobiomeX is well tolerated at studied doses. Reported effects can include: Generally well-tolerated: the 12-week human study reported no significant safety concerns. Mild digestive symptoms such as gas or bloating can occur as gut bacteria ferment the flavonoids. It may also interact with some medications. MicrobiomeX is not right for everyone, so check with a healthcare provider first if you are pregnant or breastfeeding, have a medical condition, or take prescription medication.

Does MicrobiomeX interact with any medications?

Possible interactions include: Made partly from grapefruit, but standardized to flavonoids (hesperidin, naringin) rather than the furanocoumarins behind the classic grapefruit drug interaction, so that specific risk is low; still, check with a pharmacist if you take grapefruit-sensitive medications. If you take prescription medication, check with a pharmacist or doctor before using it.

How strong is the scientific evidence for MicrobiomeX?

NutraSmarts rates the evidence for MicrobiomeX as Limited (2 out of 5). It is backed by 2 clinical trials and 2 cited references summarized on this page. A higher rating reflects more, larger, and better-designed human studies.

References(2 citations)

Evidence ratings on NutraSmarts are based on the totality of human clinical research, with emphasis on randomized controlled trials, meta-analyses, and systematic reviews. The references below directly support claims made throughout this page.

  1. Maurer Sost M, Stevens Y, Salden B, Troost F, Masclee A, Venema K. Citrus Extract High in Flavonoids Beneficially Alters Intestinal Metabolic Responses in Subjects with Features of Metabolic Syndrome. Foods. 2023;12(18):3413. doi:10.3390/foods12183413.PubMedUsed to support: The pivotal human trial: 500 mg/day citrus flavonoid extract for 12 weeks in adults with features of metabolic syndrome significantly shifted the SCFA profile toward butyrate (p=0.022) and produced a non-significant trend toward lower fecal calprotectin (p=0.058). Single manufacturer-associated study measuring gut biomarkers.
  2. Sost MM, Ahles S, Verhoeven J, Verbruggen S, Stevens Y, Venema K. A Citrus Fruit Extract High in Polyphenols Beneficially Modulates the Gut Microbiota of Healthy Human Volunteers in a Validated In Vitro Model of the Colon. Nutrients. 2021;13(11):3915. doi:10.3390/nu13113915.PubMedUsed to support: In vitro TIM-2 colon-model evidence that the citrus extract dose-dependently increases beneficial bacteria (e.g., Roseburia) and cumulative short-chain fatty acid production; in this model the SCFA shift favored acetate rather than butyrate. Mechanistic support, not a clinical outcome.